Vijini Mallawaarachchi

@Vini2

Research Fellow in Bioinformatics | PhD in Computer Science

Flinders University Adelaide, Australia

154

Followers

Following

Public Repos

Private Repos

Language Breakdown

Lines of code distribution across 32 owned repositories

32.9M Total LOC

Jupyter Notebook

27,453,433 lines

83.4%

N/A

Java

2,904,475 lines

8.8%

N/A

Python

1,201,831 lines

3.7%

N/A

386,610 lines

1.2%

N/A

JavaScript

323,350 lines

1.0%

N/A

Other

635,414 lines

1.9%

N/A

I-Shaped Developer

I-shaped

Specialist — deep expertise in Jupyter Notebook

Jupyter Notebook

Java

Python

JavaScript

Collaboration Network

Global Impact visualization

LIVE

0 active collaborators

Repos

PRs

Growth

+18%

Top Collaborators

No collaborator data yet.

Coding Streak

Contribution activity over the past year

5 days

900

Contributions

829

Commits

Pull Requests

Jun Jul Aug Sep Oct Nov Dec Jan Feb Mar Apr May Jun

Based on GitHub activity

Less

Followers 154

Ali Yaşar

@helallao

Seckin Yasar

@seckinyasar

Phaedra

@phaedromics

Boy

@An4Dev

ElijahMoulton

@zhaorui-bi

View All

Following

50 total

Rhys Newell

@rhysnewell

Camilo García

@camilogarciabotero

Yapeng Lang

@YapengLang

richard morris

@khiron

Kathie Mihindukulasuriya

@mihinduk

View All Network

Synced via GitHub

Top Repositories

phables

🫧🧬 From fragmented assemblies to high-quality bacteriophage genomes

85 6

Python

agtools

🛠️🧬 A Software Framework to Manipulate Assembly Graphs

20 1

Python

reneo

🦠🧬 Unraveling Viral Genomes from Metagenomes

11 2

Python

my-bioinformatics-scripts

Scripts that I need to work with bioinformatics data

5 0

Python

ParallelMatrixMultiplicationUsingOpenMP

Parallel Matrix Multiplication Using OpenMP

5 2

C++

Nektool

Cookiecutter profile for making a NextFlow-based bioinformatics tool

2 0

Python

awesome-virome

A listing of software, tools and databases useful for virome analysis

1 0

HTML

longstrain

LongStrain: Strain resolution of microbial genomes using long reads

1 0

Python

distribin

Distributed metagenomic binning

1 0

Python

CheckS

Checking the presence of a species in a metagenomics sample with known taxonomic composition

1 0

Python

Open Source Impact

Contributions to external projects

59 merged PRs

bioconda/bioconda-recipes

1836

metagentools/MetaCoAG

FlindersFAME/flindersfame.github.io

metagentools/gbintk

anuradhawick/kmertools

linsalrob/PHROG_structures

gbouras13/phold-plot-wasm-app

metagentools/graphbin-viz

Contributed to 8 repositories